→ summary
******************************************************************************************
Module Evolife.Genetics.Genome:
==============================
EVOLIFE: Module Genome:
Definition of genes as DNA segments having semantics
******************************************************************************************
**************************************************************************************
Class Gene:
==========
Actual gene (semantic segment on DNA) with intensity
A Gene also knows its locus (position in the list of genes, as defined in genetic map)
**************************************************************************************
----------------------------------------------------------------------------------
Method Gene.__init__:
====================
A gene knows its intensity and its locus (position in the list of genes, as defined in genetic map)
----------------------------------------------------------------------------------
Arguments:
. gene_locus
. intensity
**************************************************************************************
Class Genome: inherits from Evolife.Genetics.DNA.DNA
============
class Genome: list of genes carried by individuals
**************************************************************************************
----------------------------------------------------------------------------------
Method Genome.__init__
----------------------------------------------------------------------------------
Arguments:
. Scenario
----------------------------------------------------------------------------------
Method Genome.update:
====================
gene values are read from DNA and stored in Genes
----------------------------------------------------------------------------------
----------------------------------------------------------------------------------
Method Genome.gene_value:
========================
absolute intensity addressed trough name
----------------------------------------------------------------------------------
Arguments:
. name
----------------------------------------------------------------------------------
Method Genome.gene_relative_value:
=================================
relative intensity (between 0 and 100) addressed through name
----------------------------------------------------------------------------------
Arguments:
. name
----------------------------------------------------------------------------------
Method Genome.locus_value:
=========================
absolute intensity addressed trough locus
----------------------------------------------------------------------------------
Arguments:
. locus
----------------------------------------------------------------------------------
Method Genome.locus_relative_value:
==================================
relative intensity (between 0 and 100) addressed through locus
----------------------------------------------------------------------------------
Arguments:
. locus
----------------------------------------------------------------------------------
Method Genome.signature:
=======================
returns all gene relative values - useful for statistics and display
----------------------------------------------------------------------------------
Back to Evolife